The detailed information of tRNA gene sequence


Sequence ID>WENV180088603
Genome IDMPMF02038214
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 960
End posion on genome 872
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatgaatatt
tRNA gene sequence 
GGAGAGGTGGCTCGAGTGGTTGAAGGCGGCTGTCTTGAAAACAGCTAAGGGGGAAACTCC
TTCGAGGGTTCGAATCCCTCCCTCTCCGCaa
Downstream region at tRNA end position 
cttgacattt
Secondary structure (Cloverleaf model)
>WENV180088603	Ser	TGA
                   t      GCaa cttgacattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T G A G        G      | | | | |     G
  G         C T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    T G A          G     TAAGGGGGAAACTCCTTC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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