The detailed information of tRNA gene sequence


Sequence ID>WENV180088622
Genome IDMPMF02039023
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1420
End posion on genome 1495
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaattcaaaa
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTAGAGCGTCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAAT
CTCCTCAGCTCCACCA
Downstream region at tRNA end position 
gttaaaaccg
Secondary structure (Cloverleaf model)
>WENV180088622	Ala	TGC
                   a      ACCA gttaaaaccg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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