The detailed information of tRNA gene sequence


Sequence ID>WENV180088623
Genome IDMPMF02039023
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1509
End posion on genome 1585
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaaccggtc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCGCCCCTGATAAGGGCGAGGTCACTGGTTCAAA
TCCAGTTAGGCCCACCA
Downstream region at tRNA end position 
tcccggattt
Secondary structure (Cloverleaf model)
>WENV180088623	Ile	GAT
                   c      ACCA tcccggattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T A
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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