The detailed information of tRNA gene sequence


Sequence ID>WENV180088676
Genome IDMPMF02041225
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 456
End posion on genome 550
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aacaaaattt
tRNA gene sequence 
GGGGATGATTGCGAGGCTGGTGCCCGTCGCGGTCTTCAAAACCGTTGTCCCGGTGTGAGC
CGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttaaaaacg
Secondary structure (Cloverleaf model)
>WENV180088676	SeC	TCA
                   t      GCCA tttaaaaacg
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       A G C G       C T G G G     C
    G         | | +                 T T
    G       C C G T
      T G C        C     TGTCCCGGTGTGAGCCGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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