The detailed information of tRNA gene sequence


Sequence ID>WENV180088677
Genome IDMPMF02041288
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4104
End posion on genome 4030
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cccattattt
tRNA gene sequence 
CAAGGCGTAGCGCAGTCCGGTAGCGCACTGTGTTCGGGACGCAGGGGTCGGAGGTTCAAA
TCCTCTCGCCTCGACat
Downstream region at tRNA end position 
tttttacttc
Secondary structure (Cloverleaf model)
>WENV180088677	Pro	CGG
                   t      ACat tttttacttc
                     C - G
                     A   C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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