The detailed information of tRNA gene sequence


Sequence ID>WENV180088680
Genome IDMPMF02041404
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 112
End posion on genome 23
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acctagctag
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCGCACGCTTGGAAAGTGTGTATACGAGCAATCGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttagcaacgc
Secondary structure (Cloverleaf model)
>WENV180088680	Ser	GGA
                   g      GCCA ttagcaacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATACGAGCAATCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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