The detailed information of tRNA gene sequence


Sequence ID>WENV180088682
Genome IDMPMF02041538
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 527
End posion on genome 453
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tagagtttta
tRNA gene sequence 
GGGGCTGTAGCTCAATGGGAGAGCACCTGCCTTGCACGTAGGGGGTTGCTAGTTCGAATC
TAGTCAGCTCCACCA
Downstream region at tRNA end position 
gtgcgggcat
Secondary structure (Cloverleaf model)
>WENV180088682	Ala	TGC
                   a      ACCA gtgcgggcat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G A T C     A
        A A        A      + | | | |     G
      T     C T C G       G C T A G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTT
                    C - G
                    C - G
                    T - A
                    G + T
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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