The detailed information of tRNA gene sequence


Sequence ID>WENV180088695
Genome IDMPMF02042242
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 269
End posion on genome 356
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcctgcctaa
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCCTGGAAAGCGTGTTGAGTGCAAGCTCTC
GCAGGTTCGAATCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
tgtaaatata
Secondary structure (Cloverleaf model)
>WENV180088695	Ser	GGA
                   a      GCCA tgtaaatata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTGAGTGCAAGCTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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