The detailed information of tRNA gene sequence


Sequence ID>WENV180088697
Genome IDMPMF02042416
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 6475
End posion on genome 6376
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aacaaagcgt
tRNA gene sequence 
GGAAGTGCTTGCACACCTGGTGGTGGCCTCGGTCTTCAAAACCGTCGGATCGTACGTTAA
CCGTGTGATCGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ttttttcttg
Secondary structure (Cloverleaf model)
>WENV180088697	SeC	TCA
                   t      GCCA ttttttcttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    T     T A C C C     A
      C C A        T      + | | | |     G
    T       C A C G       G T G G G     C
    G           | |                 T T
    G       T G G C
      T G G        C     CGGATCGTACGTTAACCGTGTGATCG
                    T   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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