The detailed information of tRNA gene sequence


Sequence ID>WENV180088714
Genome IDMPMF02043692
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3995
End posion on genome 3908
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtctccccgg
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGACGATCGGGGCGCTCTCGAAAAGCGTTGTGGCCTCGCGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
ctcagaatca
Secondary structure (Cloverleaf model)
>WENV180088714	Ser	CGA
                   g      GCtg ctcagaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    A       T C G G
      C G A        G     TGTGGCCTCGCGGTCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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