The detailed information of tRNA gene sequence


Sequence ID>WENV180088742
Genome IDMPMF02045127
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 7278
End posion on genome 7192
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cttatcggta
tRNA gene sequence 
GCCAGGGTCGCATAGCCCGGTATTGCGGTGGCCTCGAAAGCCACTGGGAGAAATCCCGCG
GGGGTTCAAATCCCTCCCCTGGCGCCA
Downstream region at tRNA end position 
tgattccttt
Secondary structure (Cloverleaf model)
>WENV180088742	Ser	CGA
                   a      GCCA tgattccttt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T A C G       G G G G G     C
    C         | | |                 T T
    G       T T G C
      G T A        G     TGGGAGAAATCCCGC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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