The detailed information of tRNA gene sequence


Sequence ID>WENV180088771
Genome IDMPMF02046295
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3276
End posion on genome 3200
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccaaatccat
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCAAGGGTTCGAA
TCCCTTATGGTCCACCA
Downstream region at tRNA end position 
aaagtccacc
Secondary structure (Cloverleaf model)
>WENV180088771	Ala	TGC
                   t      ACCA aaagtccacc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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