The detailed information of tRNA gene sequence


Sequence ID>WENV180088781
Genome IDMPMF02047211
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3127
End posion on genome 3201
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgtcccctt
tRNA gene sequence 
GGCGACGTACCCAAGCGGTCTAAGGGAGCGGTCTGCAAAACCGCGATTCATCGGTTCGAA
TCCGATCGTCGCCTCta
Downstream region at tRNA end position 
attttgagcg
Secondary structure (Cloverleaf model)
>WENV180088781	Cys	GCA
                   t      TCta attttgagcg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      | | | | |     G
    G       A C C C       A T C G G     C
    G         | | |                 T T
    T       A G G G
      C T A        A     GATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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