The detailed information of tRNA gene sequence


Sequence ID>WENV180088811
Genome IDMPMF02048622
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 449
End posion on genome 373
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taccggctcg
tRNA gene sequence 
GGGCGCATAGCTCAGTTGGTTAGAGCGCTGTGTTCACATCGCAGAGGTCCCTGGTTCGAA
TCCAGGTGCGCCCACCA
Downstream region at tRNA end position 
tttttctgca
Secondary structure (Cloverleaf model)
>WENV180088811	Val	CAC
                   g      ACCA tttttctgca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          T A
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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