The detailed information of tRNA gene sequence


Sequence ID>WENV180088827
Genome IDMPMF02049618
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 17673
End posion on genome 17597
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gagctgatct
tRNA gene sequence 
GGAGTCGTAGTTAAGTTGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCGACTCCGCCA
Downstream region at tRNA end position 
tcgaagcccc
Secondary structure (Cloverleaf model)
>WENV180088827	Asp	GTC
                   t      GCCA tcgaagcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       A T T G       G C G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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