The detailed information of tRNA gene sequence


Sequence ID>WENV180088830
Genome IDMPMF02049666
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2915
End posion on genome 3008
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tagacaattt
tRNA gene sequence 
GGGAATGATTAGGAGGCTGGTGCCCCTCGCGGTCTTCAACACCGTTGTCCCCGTGATAAG
CGGGGAGTTGGGTTCGATTCCCAAACGTTCCCGCaa
Downstream region at tRNA end position 
atatttaatg
Secondary structure (Cloverleaf model)
>WENV180088830	SeC	TCA
                   t      GCaa atatttaatg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   A          T T
                    T     A A C C C     A
      C G G        T      | | | | |     G
    T       A G G A       T T G G G     C
    G         | | |                 T T
    G       C C C T
      T G C        C     TGTCCCCGTGATAAGCGGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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