The detailed information of tRNA gene sequence


Sequence ID>WENV180088832
Genome IDMPMF02049838
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 43
End posion on genome 119
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aagcttaaat
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGTCGACTCATAATCGATTGGTCCTTGGTTCAAG
TCCAAGTAGGCCCACCA
Downstream region at tRNA end position 
aactcaacaa
Secondary structure (Cloverleaf model)
>WENV180088832	Ile2	CAT
                   t      ACCA aactcaacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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