The detailed information of tRNA gene sequence


Sequence ID>WENV180088844
Genome IDMPMF02050507
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1420
End posion on genome 1494
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aattgagtcT
tRNA gene sequence 
GCAGGTTTAGCAATTTGGAAATGCTCTGTTCTCATAAAGCAGCTAAAGTGAGTTCGATCC
TCACAACCTGCATCa
Downstream region at tRNA end position 
gggagtgtga
Secondary structure (Cloverleaf model)
>WENV180088844	Ile2	CAT
                   T      ATCa gggagtgtga
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A
                     T - A          C T
                    T     C A C T C     A
        T T        A      | | | | |     G
      T     A A C G       G T G A G     C
      G       | | |                 T T
      G     A T G C
        A A        T     CTAAA
                    C - G
                    T - A
                    G - C
                    T + G
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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