The detailed information of tRNA gene sequence


Sequence ID>WENV180088856
Genome IDMPMF02051127
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2958
End posion on genome 3030
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gactgattta
tRNA gene sequence 
GGGGCATTAGCTCAGTTGGTAGAGCGCTTCAATGGCATTGAAGAGGTCAACGGTTCGATT
CCGTTATGCTCCAgtc
Downstream region at tRNA end position 
ttcgttcgac
Secondary structure (Cloverleaf model)
>WENV180088856	Ala	GGC
                   a      Agtc ttcgttcgac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          T T
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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