The detailed information of tRNA gene sequence


Sequence ID>WENV180088857
Genome IDMPMF02051144
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 487
End posion on genome 413
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattaatgat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCAAA
TCCTGTCCCCGCTACag
Downstream region at tRNA end position 
aagaaaaacc
Secondary structure (Cloverleaf model)
>WENV180088857	fMet	CAT
                   t      ACag aagaaaaacc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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