The detailed information of tRNA gene sequence


Sequence ID>WENV180088874
Genome IDMPMF02052014
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1017
End posion on genome 927
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaagatgca
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCGGTTTCGAAAGCCGTTGACGGGTAATCCTCG
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gagataataa
Secondary structure (Cloverleaf model)
>WENV180088874	Ser	CGA
                   a      GCCA gagataataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGACGGGTAATCCTCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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