The detailed information of tRNA gene sequence


Sequence ID>WENV180088890
Genome IDMPMF02052784
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4215
End posion on genome 4139
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tcagaggttc
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCGGCGGACTCATAATCCGTTGGTCCCAGGTTCGAG
CCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
acattgaggc
Secondary structure (Cloverleaf model)
>WENV180088890	Ile2	CAT
                   c      ACCA acattgaggc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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