The detailed information of tRNA gene sequence


Sequence ID>WENV180088891
Genome IDMPMF02052784
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4128
End posion on genome 4052
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
acattgaggc
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCGCTGGTTTCACATACCAGAGGTCGCTGGTTCAAA
TCCAGCATCGCCCACCA
Downstream region at tRNA end position 
ttcaccccgg
Secondary structure (Cloverleaf model)
>WENV180088891	Val	CAC
                   c      ACCA ttcaccccgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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