The detailed information of tRNA gene sequence


Sequence ID>WENV180088922
Genome IDMPMF02054898
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 54
End posion on genome 130
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ctaattttta
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTACACTCATAATGTATTGGTCCCAGGTTCGAA
TCCTGGCGGGCCCACCA
Downstream region at tRNA end position 
actaagtgca
Secondary structure (Cloverleaf model)
>WENV180088922	Ile2	CAT
                   a      ACCA actaagtgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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