The detailed information of tRNA gene sequence


Sequence ID>WENV180088942
Genome IDMPMF02055791
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 215
End posion on genome 126
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagtgtaaat
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCTGAACGGGGCACCCTGCTAAGGTGTTAGGCTCGAAAGGGTC
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ccctacgctc
Secondary structure (Cloverleaf model)
>WENV180088942	Ser	GCT
                   t      GCCA ccctacgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    C       A C G G
      T G A        G     TAGGCTCGAAAGGGTCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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