The detailed information of tRNA gene sequence


Sequence ID>WENV180088946
Genome IDMPMF02055857
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 883
End posion on genome 975
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catttgacac
tRNA gene sequence 
GGAGAGGTGGCAGAGATGGTTGATCGCACCAGGTTGCTAACTTGGCAAACGGAGTAATTC
GTTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aacattattt
Secondary structure (Cloverleaf model)
>WENV180088946	Ser	GCT
                   c      GCCA aacattattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T A G A        G      | | | | |     G
  G         G A C G       G A G G G     C
  G         +   | |                 T T
  T         T C G C
    T G A          A     CAAACGGAGTAATTCGTTTC
                    C - G
                    C - G
                    A - T
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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