The detailed information of tRNA gene sequence


Sequence ID>WENV180088962
Genome IDMPMF02057044
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1825
End posion on genome 1752
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ccgcttcgac
tRNA gene sequence 
TGCGGGGTAGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCGAA
TCCTGCCCCCGCTAttg
Downstream region at tRNA end position 
caagcagccc
Secondary structure (Cloverleaf model)
>WENV180088962	fMet	CAT
                   c      Attg caagcagccc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | + | | |     G
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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