The detailed information of tRNA gene sequence


Sequence ID>WENV180089019
Genome IDMPMF02060062
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 619
End posion on genome 543
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttccttaggt
tRNA gene sequence 
GGCGCATTCGTCTAGCGGCCTAGGACACCGCCCTCTCAAGGCGGAGATCAGGAGTTCGAA
TCTCCTATGCGCTACCA
Downstream region at tRNA end position 
agtattttga
Secondary structure (Cloverleaf model)
>WENV180089019	Glu	CTC
                   t      ACCA agtattttga
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T C C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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