The detailed information of tRNA gene sequence


Sequence ID>WENV180089078
Genome IDMPMF02063023
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 113
End posion on genome 187
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atattactgg
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGAGGTTCAAA
TCCTTCTCCCGCTACaa
Downstream region at tRNA end position 
agaagaggac
Secondary structure (Cloverleaf model)
>WENV180089078	fMet	CAT
                   g      ACaa agaagaggac
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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