The detailed information of tRNA gene sequence


Sequence ID>WENV180089094
Genome IDMPMF02064374
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1400
End posion on genome 1476
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cccttgttgt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGATGGGCTCATAACCCATAGGTCGTAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
caatttgaga
Secondary structure (Cloverleaf model)
>WENV180089094	fMet	CAT
                   t      ACCA caatttgaga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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