The detailed information of tRNA gene sequence


Sequence ID>WENV180089119
Genome IDMPMF02065979
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 574
End posion on genome 648
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctctaaaaag
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCACAGGCTTCATAAGCCTGGGGTCGCCGGTTCAAG
TCCGGCCGCCGCTACtt
Downstream region at tRNA end position 
cctttctgct
Secondary structure (Cloverleaf model)
>WENV180089119	Met	CAT
                   g      ACtt cctttctgct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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