The detailed information of tRNA gene sequence


Sequence ID>WENV180089226
Genome IDMPMF02072402
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 259
End posion on genome 168
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaacattt
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGTGAGTAATCGGGGATAACC
TGGTTCGAGAGTTCGAATCTCTCCCTCTCCGCac
Downstream region at tRNA end position 
tttaatagac
Secondary structure (Cloverleaf model)
>WENV180089226	Ser	GCT
                   t      GCac tttaatagac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G A G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAATCGGGGATAACCTGGTTC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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