The detailed information of tRNA gene sequence


Sequence ID>WENV180089254
Genome IDMPMF02074141
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 654
End posion on genome 565
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnct
tRNA gene sequence 
GGAGGGATGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTGTGCGTTTACGCGTA
CCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
atataccatt
Secondary structure (Cloverleaf model)
>WENV180089254	Ser	GGA
                   t      GCCA atataccatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTGCGTTTACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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