The detailed information of tRNA gene sequence


Sequence ID>WENV180089285
Genome IDMPMF02075567
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 13370
End posion on genome 13285
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattcatcca
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAGGCGGCGGTCTTGAAAACCGTTGAGGGTACCCCCCTC
CCAGGGTTCGAATCCCTGTCTCTCCGatg
Downstream region at tRNA end position 
aatagaggag
Secondary structure (Cloverleaf model)
>WENV180089285	Ser	TGA
                   a      Gatg aatagaggag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         + | |                 T T
    T       A G G C
      C G A        G     TGAGGGTACCCCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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