The detailed information of tRNA gene sequence


Sequence ID>WENV180089312
Genome IDMPMF02077468
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 64
End posion on genome 139
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaagaaatt
tRNA gene sequence 
CGGGGTGTAGCGTAGCCCGGTTAGCGCGCCTGCTTTGGGAGCAGGAGGTCGGAGGTTCGA
ATCCTCTCACCCCGACac
Downstream region at tRNA end position 
agtattgtct
Secondary structure (Cloverleaf model)
>WENV180089312	Pro	TGG
                   t      ACac agtattgtct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  C         T G C G       G G A G G     C
  G         + | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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