The detailed information of tRNA gene sequence


Sequence ID>WENV180089316
Genome IDMPMF02077805
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 49
End posion on genome 135
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataaataatt
tRNA gene sequence 
GGAGGGTTCGCATAGTGGTCTAGTGCGCTCGCTTGGAAAGCGAGTATGCCCAAAAGGCAT
CGAGGGTTCGAATCCCTCACTCTCCGCaa
Downstream region at tRNA end position 
agtatcttaa
Secondary structure (Cloverleaf model)
>WENV180089316	Ser	GGA
                   t      GCaa agtatcttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TATGCCCAAAAGGCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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