The detailed information of tRNA gene sequence


Sequence ID>WENV180089318
Genome IDMPMF02077880
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3653
End posion on genome 3742
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccgcttggt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAGGCGCACGCCTGGAAAGCGTGATTACTTGAAAGGGTA
ACGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttttcttcg
Secondary structure (Cloverleaf model)
>WENV180089318	Ser	GGA
                   t      GCCA tttttcttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     ATTACTTGAAAGGGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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