The detailed information of tRNA gene sequence


Sequence ID>WENV180089344
Genome IDMPMF02079149
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 411
End posion on genome 497
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcatgttat
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGCCTAGTGCGCTCGCTTGGAAAGCGAGTATGGCGCAAGCCAT
CGTGGGTTCGAATCCCACCCTCTCCGCtt
Downstream region at tRNA end position 
tcgattgttt
Secondary structure (Cloverleaf model)
>WENV180089344	Ser	GGA
                   t      GCtt tcgattgttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G         + | | |                 T T
  C         G T G C
    C T A          G     TATGGCGCAAGCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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