The detailed information of tRNA gene sequence


Sequence ID>WENV180089379
Genome IDMPMF02081999
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2988
End posion on genome 3064
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctaatttaat
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCGCGGGACTCATAAGCCCGAGGTCAGTGGTTCAAT
TCCACTTCCCGCTACCA
Downstream region at tRNA end position 
aaaacagcga
Secondary structure (Cloverleaf model)
>WENV180089379	Met	CAT
                   t      ACCA aaaacagcga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T T
                    T     T C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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