The detailed information of tRNA gene sequence


Sequence ID>WENV180089389
Genome IDMPMF02082423
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 118
End posion on genome 207
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgaattaaaa
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCGCACGCTTGGAAAGTGTGTGTACCCTCACAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
actaggcgga
Secondary structure (Cloverleaf model)
>WENV180089389	Ser	GGA
                   a      GCCA actaggcgga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TGTACCCTCACAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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