The detailed information of tRNA gene sequence


Sequence ID>WENV180089391
Genome IDMPMF02082534
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1224
End posion on genome 1313
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagagcagtc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGAATGGGGCGGTCTCGAAAACCGTTGTGGTCGCAAGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttcaccttgg
Secondary structure (Cloverleaf model)
>WENV180089391	Ser	CGA
                   c      GCCA ttcaccttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTGGTCGCAAGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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