The detailed information of tRNA gene sequence


Sequence ID>WENV180089416
Genome IDMPMF02083668
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 286
End posion on genome 373
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccaaagtaa
tRNA gene sequence 
GGAAGGGTCGCATAGCGGCCATTGCACCTGCTTGGAAAGCAGGAAGCCCTCACGGGCTTC
GTGGGTTCGAGTCCCGCCCCTTCCGCCA
Downstream region at tRNA end position 
gtttaccaaa
Secondary structure (Cloverleaf model)
>WENV180089416	Ser	GGA
                   a      GCCA gtttaccaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C G A        C      | + | | |     G
    G       T A C G       G T G G G     C
    G         | | |                 T T
    C       T T G C
      C A          A     AAGCCCTCACGGGCTTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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