The detailed information of tRNA gene sequence


Sequence ID>WENV180089435
Genome IDMPMF02084470
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2667
End posion on genome 2593
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattaatgat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCAAA
TCCTGTCCCCGCTACag
Downstream region at tRNA end position 
aggaaaaacc
Secondary structure (Cloverleaf model)
>WENV180089435	fMet	CAT
                   t      ACag aggaaaaacc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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