The detailed information of tRNA gene sequence


Sequence ID>WENV180089455
Genome IDMPMF02085562
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1621
End posion on genome 1547
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aatatgttga
tRNA gene sequence 
GGGCCGGTCGTCTAGTCTGGTAGGATGCCTCCTTGGCATGGAGGTGATCGAGGGTTCAAA
TCCCTCCCGGTCCACtt
Downstream region at tRNA end position 
ccttctaata
Secondary structure (Cloverleaf model)
>WENV180089455	Ala	GGC
                   a      ACtt ccttctaata
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    C       T C T G       G A G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        G     TGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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