The detailed information of tRNA gene sequence


Sequence ID>WENV180089464
Genome IDMPMF02086162
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 487
End posion on genome 389
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgcggcctag
tRNA gene sequence 
GGAGGTACTTCCCGTCTGGTGACGGGCCTGGTCTTCAAAACCGGTCGGGCCGCAGCGGAA
GTTGTGGTTGGTGGGTTCGATTCCCATGTGCCTCCGCCA
Downstream region at tRNA end position 
aagagacggg
Secondary structure (Cloverleaf model)
>WENV180089464	SeC	TCA
                   g      GCCA aagagacggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     A - T
                     C - G          T T
                    T     T A C C C     A
      T C T        T      + | | | |     G
    G       G C C C       G T G G G     C
    G       | | | |                 T T
    T       C G G G
      G A          C     TCGGGCCGCAGCGGAAGTTGTGGTTG
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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