The detailed information of tRNA gene sequence


Sequence ID>WENV180089465
Genome IDMPMF02086169
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 20416
End posion on genome 20324
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccgccaagt
tRNA gene sequence 
GGAGAGGTGGCTGAGTCCGGTTTAAGGCACACGATTCGAAATCGTGCGTAGGCTTATACC
CTACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctttgcccct
Secondary structure (Cloverleaf model)
>WENV180089465	Ser	CGA
                   t      GCCA ctttgcccct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T T A        A     CGTAGGCTTATACCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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