The detailed information of tRNA gene sequence


Sequence ID>WENV180089480
Genome IDMPMF02086639
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 11244
End posion on genome 11169
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcaccgcgt
tRNA gene sequence 
GCCGGGGTGGCGTAGTTGGTAGCGCGCCGGACTCATAATCCGGAGGTCGCGGGTTCAAAC
CCCGCTCCCGGCACCA
Downstream region at tRNA end position 
tgatttttta
Secondary structure (Cloverleaf model)
>WENV180089480	Met	CAT
                   t      ACCA tgatttttta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          C A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    T       T G C G       G C G G G     C
    G       + | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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