The detailed information of tRNA gene sequence


Sequence ID>WENV180089487
Genome IDMPMF02086937
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4208
End posion on genome 4298
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaagataaaa
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGTGGTCTTGAAAACCATTGACGGGTAATCCTCG
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gatcaaagag
Secondary structure (Cloverleaf model)
>WENV180089487	Ser	TGA
                   a      GCCA gatcaaagag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACGGGTAATCCTCGTCC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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