The detailed information of tRNA gene sequence


Sequence ID>WENV180089512
Genome IDMPMF02088631
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1495
End posion on genome 1420
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gcgccatgaa
tRNA gene sequence 
GGGCCGGTAGCTCAGTCGGTTAGAGCAAGCGACTCATAATCGCTGGGTCGGGGGTTCGAG
TCCCTCCCGGCCTACCt
Downstream region at tRNA end position 
gtcggttttg
Secondary structure (Cloverleaf model)
>WENV180089512	Ile2	CAT
                   a      ACCt gtcggttttg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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