The detailed information of tRNA gene sequence


Sequence ID>WENV180089521
Genome IDMPMF02089115
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 242
End posion on genome 336
Amino Acid SeC
Anticodon GCA
Upstream region at tRNA start position 
ccgggatcgG
tRNA gene sequence 
GAGGTGTCCGGGTCCCGGTGGGTCTCGCGGACTGCAAATTCGTTGGGCGGCGTAGCGACG
GGGCGTCGGTGGGTTCGACTCCCGTGCACCTCCGcc
Downstream region at tRNA end position 
gcgggtttga
Secondary structure (Cloverleaf model)
>WENV180089521	SeC	GCA
                   G      CGcc gcgggtttga
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T + G          T C
                    C     T G C C C     A
      C C C        C      + + | | |     G
    G       T G G G       G T G G G     C
    G       + + | +                 T T
    T       G T C T
      G G          C     TGGGCGGCGTAGCGACGGGGCGTCG
                    G + T
                    C - G
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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